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0.1.2

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aimino

AIMinO Napari frontend application with command execution and agent client

agentaibioinformaticsimage-analysisnapari
Published11 Dec 2025
Direct dependencies16
Transitive dependenciesNot calculated

README

Version 0.1.2 documentation

AIMinO Frontend Package

A Napari frontend application for AIMinO, providing command execution and agent client functionality for bioimage analysis.

Package Structure

This package uses a standard src-layout structure:

aimino_frontend/
├── src/
│   └── aimino_frontend/  # Python package source
│       ├── __init__.py
│       ├── aimino_core/  # Core command models, handlers, and executor
│       │   ├── handlers/ # Various command handlers
│       │   └── ...
│       └── napari_app/   # Napari application entry points and agent client
│           ├── main.py  # Main launch function
│           └── client_agent.py  # Agent client
├── pyproject.toml        # Package configuration
└── README.md

Installation

Install from PyPI

pip install aimino

Development Installation

Install in development mode from the aimino_frontend directory:

pip install -e .

Production Installation

pip install .

Build Distribution Packages

pip install build
python -m build

This will generate a dist/ directory containing .whl and .tar.gz files.

Usage

After installation, you can use the package in the following ways:

As a Command Line Tool

aimino-napari

As a Python Module

from aimino_frontend.napari_app import launch
launch()

Import Core Functionality

from aimino_frontend.aimino_core import execute_command, CommandExecutionError
from aimino_frontend.napari_app.client_agent import AgentClient

Dependencies

Main dependencies include:

  • napari: Napari visualization framework
  • pydantic>=2: Data validation
  • httpx: HTTP client
  • google-genai: Google GenAI SDK
  • qtpy: Qt Python bindings
  • numpy: Numerical computing

See pyproject.toml for the complete dependency list.

Development

Install development dependencies:

pip install -e ".[dev]"

Run tests:

pytest

Napari Plugin

This package includes a Napari plugin that can be accessed through the Napari plugin menu. The plugin provides an interactive chatbox interface for AI-powered image analysis commands.

License

MIT License

Authors

AIMinO Team: Yingxiao (TK) Shi, Kida Huang, Yinuo Cheng, Yuan Tian

Project Links

Downloads & popularity

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Declared dependencies 16

Native requirements
16 direct targetsNot calculated transitive count
Package / targetRequirementRelationship
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Distribution files

2 collected
aimino-0.1.2-py3-none-any.whl

bdist_wheel · 64.28 KB · Python py3

Source file
aimino-0.1.2.tar.gz

sdist · 46.95 KB · Python source

Source file

Repository

PENDING
kidagsd/ac215_aimino

Shared repository data · GitHub

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Observed since 21 Oct, 11:19 UTC

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package_version:122bf3f43397725dd685b80c2daa702dc623cf3677b199cc59fa44338e84104e

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