2026.3.11.0

PyPI

agraphx

:maintainers: `andrewtarzia <https://github.com/andrewtarzia/>`_ :documentation: https://agx.readthedocs.io/en/latest/ Overview ======== ``agx`` (a graph explorer) is toolkit for enumerating graphs in the context of structure prediction. .. important:: **Warning**: This package is still very much underdevelopment and many changes are expected. Installation ============ ``agx`` can be installed with pip: .. code-block:: bash pip install agraphx Developer Setup --------------- To develop with ``agx``, you can clone the repo and use `just <https://github.com/casey/just>`_ and `uv <https://docs.astral.sh>`_ to setup the dev environment: .. code-block:: bash just setup Usage ===== Examples of usa

Published11 Mar 2026

Direct dependencies15

Transitive dependenciesNot calculated

README

Version 2026.3.11.0 documentation

:maintainers:
  `andrewtarzia <https://github.com/andrewtarzia/>`_
:documentation: https://agx.readthedocs.io/en/latest/


Overview
========

``agx`` (a graph explorer) is toolkit for enumerating graphs in the context
of structure prediction.

.. important::

  **Warning**: This package is still very much underdevelopment and many changes
  are expected.

Installation
============

``agx`` can be installed with pip:

.. code-block:: bash

  pip install agraphx

Developer Setup
---------------

To develop with ``agx``, you can clone the repo and use
`just <https://github.com/casey/just>`_ and `uv <https://docs.astral.sh>`_
to setup the dev environment:

.. code-block:: bash

  just setup


Usage
=====

Examples of usage can be seen in
`cgexplore <https://cgexplore.readthedocs.io/en/latest/>`_.

How To Cite
===========

If you use ``agx``, please cite this URL

  https://github.com/andrewtarzia/agx

And consider citing ``cgexplore``

  https://github.com/andrewtarzia/CGExplore

Acknowledgements
================

Funded by the European Union - Next Generation EU, Mission 4 Component 1
CUP E13C22002930006.

This work is now developed as part of the `Tarzia Research Group at the
University of Birmingham <https://tarziaresearchgroup.github.io>`_.

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Declared dependencies 15

Native requirements

15 direct targetsNot calculated transitive count

Package / target	Requirement	Relationship
numpy Environment { "extras": "", "marker": null, "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`numpy`	runtime
rustworkx Environment { "extras": "", "marker": null, "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`rustworkx`	runtime
networkx Environment { "extras": "", "marker": null, "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`networkx`	runtime
scipy Environment { "extras": "", "marker": null, "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`scipy`	runtime
ruff Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`ruff; extra == "dev"`	runtime
mypy Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`mypy; extra == "dev"`	runtime
pytest Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`pytest<8; extra == "dev"`	runtime
pytest-cov Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`pytest-cov; extra == "dev"`	runtime
sphinx Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`sphinx; extra == "dev"`	runtime
sphinx-copybutton Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`sphinx-copybutton; extra == "dev"`	runtime
twine Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`twine; extra == "dev"`	runtime
sphinx_rtd_theme Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`sphinx_rtd_theme; extra == "dev"`	runtime
furo Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`furo; extra == "dev"`	runtime
matplotlib Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`matplotlib; extra == "dev"`	runtime
moldoc Environment { "extras": "", "marker": "extra == \"dev\"", "requires_python": ">=3.11", "evaluation": "NOT_EVALUATED" }	`moldoc; extra == "dev"`	runtime