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1.3.2

PyPI

adpred

Prediction of Transcription Activation Domains from protein sequences

Published22 Sept 2025

Direct dependencies8

Transitive dependenciesNot calculated

README

Version 1.3.2 documentation

PyPI Conda

ADpred

A tool for prediction of Transcription Activation Domains from protein sequences.

Goals
Documentation
Contributing
Authors
Licence

Goals

The main goal is to identify regions with high AD function probability in protein sequences. Moreover, at these observed regions, a saturated mutagenesis study can reveal insights into the important residues that confer the AD function to that region.

Contributing

Contributions are welcome and encouraged.

Documentation

Authors

Ariel Erijman

Licence

ADpred is an open source software released under the MIT licence

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Declared dependencies 8

Native requirements

8 direct targetsNot calculated transitive count

Package / target	Requirement	Relationship
keras Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`keras==3.11.3`	runtime
numpy Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`numpy==2.3.3`	runtime
pandas Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`pandas==2.3.2`	runtime
plotly Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`plotly==6.3.0`	runtime
requests Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`requests==2.32.5`	runtime
requests-oauthlib Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`requests-oauthlib==2.0.0`	runtime
scikit-learn Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`scikit-learn==1.7.2`	runtime
tensorflow Environment { "extras": "", "marker": null, "requires_python": ">=3.9", "evaluation": "NOT_EVALUATED" }	`tensorflow==2.20.0`	runtime